BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB028C02LP1|AL428864
(912 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1718 1767 0.0
>3x_Contig1718
Length = 19496
Score = 1767 bits (885), Expect = 0.0
Identities = 900/912 (98%)
Strand = Plus / Minus
Query: 1 gatcnaccaactaccagaaatagcgtttttgggaagatgtaattcagggaaatctactct 60
|||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 10336 gatcaaccaactaccagaaatagcgtttttgggaagatgtaattcagggaaatctactct 10277
Query: 61 tttaaacagtgtcactacggaggtgacaagaaatagtttaaacgaatatgcaaatgcctc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 10276 tttaaacagtgtcactacggaggtgacaagaaatagtttaaacgaatatgcaaatgcctc 10217
Query: 121 caaaaaggcaggttttacaaagaccatcaattgtttcaatgtaggtgggaagtttcgcat 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 10216 caaaaaggcaggttttacaaagaccatcaattgtttcaatgtaggtgggaagtttcgcat 10157
Query: 181 cattgatactccaggatatggtactaaaggaactgtggaacaagggaaagtcacgatgga 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 10156 cattgatactccaggatatggtactaaaggaactgtggaacaagggaaagtcacgatgga 10097
Query: 241 ttatttgcataamagaagagagttacgtcgcagtttcttgctaataagtgccaathatgg 300
|||||||||||| |||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 10096 ttatttgcataaaagaagagagttacgtcgcagtttcttgctaataagtgccaataatgg 10037
Query: 301 atttagcgaatacgatgcacagatgatagatttacttgttaacgatggaattccttttga 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 10036 atttagcgaatacgatgcacagatgatagatttacttgttaacgatggaattccttttga 9977
Query: 361 matagtattcacgaagatggataccatcaaagacatggcgcaagtmgagagcattattga 420
|||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 9976 aatagtattcacgaagatggataccatcaaagacatggcgcaagtagagagcattattga 9917
Query: 421 agamagthatgttctgcgattacccacatctcctagattcattttcttaaactcaatgac 480
||| ||| ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 9916 agaaagtaatgttctgcgattacccacatctcctagattcattttcttaaactcaatgac 9857
Query: 481 aaataagcgctgtcaaamacgtttcggattagatgttttacggtatgttgtcctagaagc 540
||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 9856 aaataagcgctgtcaaaaacgtttcggattagatgttttacggtatgttgtcctagaagc 9797
Query: 541 ttgtggattattacctggggtaagaccttccaagataaagamataaagtagaaaacatag 600
||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 9796 ttgtggattattacctggggtaagaccttccaagataaagaaataaagtagaaaacatag 9737
Query: 601 aacgcatcgaggtctatcaatacagtgtattatgtggtatattatgamgtaataggtttc 660
||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 9736 aacgcatcgaggtctatcaatacagtgtattatgtggtatattatgaagtaataggtttc 9677
Query: 661 tgatggaatgatttctgatttggttaatattatacatgcgacatactgatctatttgatc 720
||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 9676 tgatggaatgatttctgatttggttaatattatacatgcgaaatactgatctatttgatc 9617
Query: 721 taagattgttatatagaaaagaagttaattcaattgtttatagtggaagtttttcgaact 780
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 9616 taagattgttatatagaaaagaagttaattcaattgtttatagtggaagtttttcgaact 9557
Query: 781 gctctaaaaaagacgggaaataaaaccaaaagagagaactatgcgactttatttttgaac 840
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 9556 gctctaaaaaagacgggaaataaaaccaaaagagagaactatgcgactttatttttgaac 9497
Query: 841 ttcgttgttcttaatttggttttagttttaatatgatattaatatgcatgawtttccgtg 900
||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 9496 ttcgttgttcttaatttggttttagttttaatatgatattaatatgcatgaatttccgtg 9437
Query: 901 tatagcttagaa 912
||||||||||||
Sbjct: 9436 tatagcttagaa 9425
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.712 1.31
Gapped
Lambda K H
1.38 0.712 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 6475
Number of Sequences: 1807
Number of extensions: 6475
Number of successful extensions: 47
Number of sequences better than 1.0e-20: 1
length of query: 912
length of database: 10,358,551
effective HSP length: 16
effective length of query: 896
effective length of database: 10,329,639
effective search space: 9255356544
effective search space used: 9255356544
T: 0
A: 40
X1: 6 (12.0 bits)
X2: 15 (29.9 bits)
S1: 12 (24.5 bits)
S2: 50 (100.3 bits)